Rdatatable / data.table
R's data.table package extends data.frame:
See what the GitHub community is most excited about today.
R's data.table package extends data.frame:
R for data science: a book
R toolkit for single cell genomics
Repository for Programming Assignment 2 for R Programming on Coursera
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data
A curated list of awesome R packages, frameworks and software.
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics
phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:
Inferring CNV from Single-Cell RNA-Seq
My awesome profile README
Community-provided extensions to Seurat
Accurate sample inference from amplicon data with single nucleotide resolution
Simple Features for R
R package for detecting doublets in single-cell RNA sequencing data
renv: Project environments for R.
RStan, the R interface to Stan
ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)
brms R package for Bayesian generalized multivariate non-linear multilevel models using Stan
Friends don't let friends make certain types of data visualization - What are they and why are they bad.
Create Generative Art with R